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Jasper Anckaert
Bioinformatician
Ghent University
Latest
A co-culture model to study modulators of tumor immune evasion through scalable arrayed CRISPR-interference screens
Exploring the cell-free total RNA transcriptome in diffuse large B-cell lymphoma and primary mediastinal B-cell lymphoma patients as biomarker source in blood plasma liquid biopsies
Large-scale benchmarking of circRNA detection tools reveals large differences in sensitivity but not in precision
mTOR Inhibition Enhances Delivery and Activity of Antisense Oligonucleotides in Uveal Melanoma Cells
Shana's paper lands cover of Nucleic Acid Therapeutics
Patient-specific alterations in blood plasma cfRNA profiles enable accurate classification of cancer patients and controls
Performance evaluation of RNA purification kits and blood collection tubes in the Extracellular RNA Quality Control (exRNAQC) study
Whole transcriptome profiling of liquid biopsies from tumour xenografted mouse models enables specific monitoring of tumour-derived extracellular RNA
mRNA capture sequencing and RT-qPCR for the detection of pathognomonic, novel, and secondary fusion transcripts in FFPE tissue: a sarcoma showcase
A 3′‐end capture sequencing method for high‐throughput targeted gene expression profiling
CIRCprimerXL: Convenient and High-Throughput PCR Primer Design for Circular RNA Quantification
CiLiQuant: Quantification of RNA Junction Reads Based on Their Circular or Linear Transcript Origin
RNA biomarkers from proximal liquid biopsy for diagnosis of ovarian cancer
The RNA Atlas expands the catalog of human non-coding RNAs
Charting Extracellular Transcriptomes in The Human Biofluid RNA Atlas
circRNA
Performance assessment of total RNA sequencing of human biofluids and extracellular vesicles
Charting extracellular transcriptomes in The Human Biofluid RNA Atlas
The RNA Atlas, a single nucleotide resolution map of the human transcriptome
SMARTer single cell total RNA sequencing
LNCipedia 5: towards a reference set of human long non-coding RNAs
Comparative analysis of naive, primed and ground state pluripotency in mouse embryonic stem cells originating from the same genetic background
decodeRNA— predicting non-coding RNA functions using guilt-by-association
Zipper plot: visualizing transcriptional activity of genomic regions
EV-TRACK: transparent reporting and centralizing knowledge in extracellular vesicle research
miSTAR: miRNA target prediction through modeling quantitative and qualitative miRNA binding site information in a stacked model structure
CiLiQuant
CIRCprimerXL
EV-TRACK
LNCipedia
miRBase Tracker
miSTAR
primerXL
RDML database
ZipperPlot
RDML-Ninja and RDMLdb for standardized exchange of qPCR data
miRBase Tracker: keeping track of microRNA annotation changes
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